All modules for which code is available
- _thread
- snakemake.assets
- snakemake.benchmark
- snakemake.checkpoints
- snakemake.common
- snakemake.common.argparse
- snakemake.common.configfile
- snakemake.common.git
- snakemake.common.tbdstring
- snakemake.common.workdir_handler
- snakemake.cwl
- snakemake.decorators
- snakemake.deployment.conda
- snakemake.deployment.containerize
- snakemake.deployment.env_modules
- snakemake.deployment.singularity
- snakemake.exceptions
- snakemake.executors
- snakemake.io
- snakemake.ioflags
- snakemake.ioutils
- snakemake.ioutils.branch
- snakemake.ioutils.evaluate
- snakemake.ioutils.exists
- snakemake.ioutils.lookup
- snakemake.ioutils.rule_items_proxy
- snakemake.ioutils.subpath
- snakemake.linting
- snakemake.logging
- snakemake.modules
- snakemake.notebook
- snakemake.output_index
- snakemake.path_modifier
- snakemake.profiles
- snakemake.remote
- snakemake.remote.AzBlob
- snakemake.remote.EGA
- snakemake.remote.FTP
- snakemake.remote.GS
- snakemake.remote.HTTP
- snakemake.remote.NCBI
- snakemake.remote.S3
- snakemake.remote.S3Mocked
- snakemake.remote.SFTP
- snakemake.remote.XRootD
- snakemake.remote.dropbox
- snakemake.remote.gfal
- snakemake.remote.gridftp
- snakemake.remote.iRODS
- snakemake.remote.webdav
- snakemake.remote.zenodo
- snakemake.resources
- snakemake.ruleinfo
- snakemake.rules
- snakemake.script
- snakemake.settings.enums
- snakemake.shell
- snakemake.sourcecache
- snakemake.target_jobs
- snakemake.template_rendering
- snakemake.unit_tests
- snakemake.utils
- snakemake.wrapper