snakemake.script.Snakemake
- class snakemake.script.Snakemake(input_, output, params, wildcards, threads, resources, log, config, rulename, bench_iteration, scriptdir=None)[source]
- __init__(input_, output, params, wildcards, threads, resources, log, config, rulename, bench_iteration, scriptdir=None)[source]
Methods
__init__
(input_, output, params, wildcards, ...)log_fmt_shell
([stdout, stderr, append])Return a shell redirection string to be used in shell() calls