snakemake.deployment.conda.Env

class snakemake.deployment.conda.Env(workflow, env_file=None, env_name=None, env_dir=None, container_img=None, cleanup=None)[source]

Conda environment from a given specification file.

__init__(workflow, env_file=None, env_name=None, env_dir=None, container_img=None, cleanup=None)[source]

Methods

`__init__`(workflow[, env_file, env_name, ...])
`check_is_file_based`()
`create`([dryrun])	Create the conda environment.
`create_archive`()	Create self-contained archive of environment.
`execute_deployment_script`(env_file, deploy_file)	Execute post-deployment script if present
`get_singularity_envvars`()

Attributes

`address`	Path to directory of the conda environment.
`address_argument`
`archive_file`	Path to archive of the conda environment, which may or may not exist.
`container_img_url`
`content`
`content_deploy`
`content_hash`
`content_pin`
`hash`
`is_containerized`
`is_named`