snakemake.script.ScriptBase

class snakemake.script.ScriptBase(path, cache_path, source, basedir, input_, output, params, wildcards, threads, resources, log, config, rulename, conda_env, conda_base_path, container_img, singularity_args, env_modules, bench_record, jobid, bench_iteration, cleanup_scripts, shadow_dir, is_local)[source]
__init__(path, cache_path, source, basedir, input_, output, params, wildcards, threads, resources, log, config, rulename, conda_env, conda_base_path, container_img, singularity_args, env_modules, bench_record, jobid, bench_iteration, cleanup_scripts, shadow_dir, is_local)[source]

Methods

__init__(path, cache_path, source, basedir, ...)

evaluate([edit])

execute_script(fname[, edit])

get_preamble()

write_script(preamble, fd)

Attributes

editable

local_path