snakemake.benchmark.BenchmarkRecord

class snakemake.benchmark.BenchmarkRecord(running_time=None, max_rss=None, max_vms=None, max_uss=None, max_pss=None, io_in=None, io_out=None, cpu_usages=None, cpu_time=None)[source]

Record type for benchmark times

__init__(running_time=None, max_rss=None, max_vms=None, max_uss=None, max_pss=None, io_in=None, io_out=None, cpu_usages=None, cpu_time=None)[source]

Methods

`__init__`([running_time, max_rss, max_vms, ...])
`get_header`()
`to_tsv`()	Return `str` with the TSV representation of this record

Attributes

`running_time`	Running time in seconds
`max_vms`	Maximal VMS in MB
`max_uss`	Maximal USS in MB
`max_pss`	Maximal PSS in MB
`io_in`	I/O read in bytes
`io_out`	I/O written in bytes
`cpu_usages`	Count of CPU seconds, divide by running time to get mean load estimate
`cpu_time`	CPU usage (user and system) in seconds
`first_time`	First time when we measured CPU load, for estimating total running time
`prev_time`	Previous point when measured CPU load, for estimating total running time
`processed_procs`	Set with procs that has been skipped
`skipped_procs`	Set with procs that has been saved
`data_collected`	Track if data has been collected